BBTools for bioinformatician !
...pping small RNA's with BBMap use the following flags to report only perfect matche...use the "copyundefined", "hdist", and "qhdist" flags together for a lot of flexibi...et the same sensitivity as BBMap by adding the flags "minid=0.76 maxindel=16k minh...2263 days ago
Basic command-line to run BLAST
..._human_blast_results.tab \ -evalue 1e-5 \ -outfmt 6 \ -max_target_seqs 1 Summary Review: command line programs such as blast use flags to get information about how...2236 days ago
Install ImageMagick from Unix Source
...cking for gcc option to accept ISO C99... (cached) none neededchecking CFLAGS for maximum warnings... -Wall...or C compiler vendor... (cached) gnu./configure: line 9486: AX_COMPILER_FLAGS: command not foundchecking CF...2138 days ago
Understanding reads mapping and flags !
Linear Alignment: An alignment of a read to a single reference sequence that may include insertions, deletions, skips and clipping, but may not include...1829 days ago