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Results for "fragments"

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• • Poonam Mahapatra@poonam

  

  TACOA: Taxonomic classification of environmental genomic fragments using a kernelized nearest neighbor approach

  TACOA is a software that can accurately predict the taxonomic origin of genomic fragments from metagenomic data sets by combining the advantages of the k -NN approach with a smoothing kernel function. TACOA can be easily installed and run on a desktop computer, therefore allowing researchers ...

  Tags: TACOA, Taxonomic, classification, environmental, genomic, fragments, KNN, Contamination

  2176 days ago

• • Neelam Jha@neelam

  

  AnchorWave

  AnchorWave (Anchored Wavefront Alignment) identifies collinear regions via conserved anchors (full-length CDS and full-length exon have been implemented currently) and breaks collinear regions into shorter fragments, i.e., anchor and inter-anchor intervals. By performing sensitive sequence alignm...

  Tags: AnchorWave, Anchored, Wavefront, Alignment, collinear, regions, conserved, anchors, CDS, exon, currently, breaks, collinear, regions, fragments, anchor, inter-anchor, intervals

  797 days ago