Results for "functional"
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...udy, and analyses whether there is enrichment for overlap of putative functional elements compared to matched...ckground DMPs. It assesses enrichment on a per cell type basis, since functional elements are differentially a...2761 days ago
ChromHMM: Chromatin state discovery and characterization
...del can then be used to systematically annotate a genome in one or more cell types. By automatically computing state enrichments for large-scale functional and annotation datasets Chrom...2588 days ago
NCBI Prokaryotic Genome Annotation Pipeline
...nomes (chromosomes and plasmids). Genome annotation is a multi-level process that includes prediction of protein-coding genes, as well as other functional genome units such as structur...2561 days ago
Web Apollo: a web-based genomic annotation editing platform
...ces in sequencing technology is that there are more and more researchers sequencing new genomes. These researchers require tools to describe the functional features of their newly seque...2488 days ago
Sequence - Evolution - Function; Computational Approaches in Comparative Genomics
...t play a critical role in the emerging new branch of biology known as functional genomics. The book provides the reader with an understanding of the principles and approaches of functional genomics and of the potential...2479 days ago
ACANA: An accurate and consistent alignment tool for DNA sequences
...the gap extension score. As an accurate alignment tool, ACANA is particularly useful in comparative sequence analysis for identifying conserved functional regulatory elements....2357 days ago
BEAP: Blast Extension and Assembly Program
...ly or indirectly, with the "primer" therefore help to "extend" the length of the original sequence for constructing a "full length" sequence for functional analysis, or at least to obta...2170 days ago
ASAR: Advanced metagenomic Sequence Analysis in R
An interactive data analysis tool for selection, aggregation and visualization of metagenomic data is presented. Functional analysis with a SEED hierarchy and pathway diagram based on K...2142 days ago
Epiviz: an interactive visualization tool for functional genomics data.
Epiviz is an interactive visualization tool for functional genomics data. It supports genome navigation like other genome browsers, but allows multiple visualizations of data within gen...2142 days ago
Mulan: Multiple-sequence local alignment and visualization for studying function and evolution
...on Mulan (http://mulan.dcode.org/), a novel method and a network server for comparing multiple draft and finished-quality sequences to identify functional elements conserved over evolu...2096 days ago
