PBSuite: Software for Long-Read Sequencing Data from PacBio
PBJelly - the genome upgrading tool. PBHoney - the structural variation discovery tool ...ills or reduces as many captured gaps as possible to produce upgraded draft genomes. ----- PBHoney -----Rea...2636 days ago
YASRA: Reference based assembler
...forms comparative assembly of short reads using a reference genome, which can differ substantially from the genome being sequenced. Mapping read...newer version) for aligning the sequences to the reference genome. Please install LASTZ (the ne...2634 days ago
2634 days ago
2632 days ago
2632 days ago
Prokka: tool for the rapid annotation of prokaryotic genomes
Prokka is a software tool for the rapid annotation of prokaryotic genomes. A typical 4 Mbp genome can be fully annotated in less than 10 minutes on a quad-core computer, and scales well to 32 cor...2629 days ago
2629 days ago
SeqMule: Automated human exome/genome variants detection
...n diagram showing intersection among different callers, and downloading databases. SeqMule can be used for both Mendelian disease study and cancer genome study.2628 days ago
2621 days ago
Pacbio Long Reads Compatible Software and Tools
...tions Detection Reference-based alignment Consensus and variant calling RNA analysis Epigenetic base modifications and methylation Barcoding Genome Browsers Run QC Frameworks...2620 days ago