Results for "genome overlapping features"
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Method in Comparative genomics !!
We present methods for the automatic determination of genome correspondence. The algorithms enable...mber of duplicated genes in the yeast genome. The remaining ambiguities in...ity. We used this test to revisit the genome of S...ational motif discovery. Based on the genome-w...2743 days ago
- Redundans pipeline assists an assembly of heterozygous genomes.Program takes as input assembl...d returns scaffolded homozygous genome assembly, that should be ...p;close the gaps resulting from genome asse...the laptop for small-to-medium size genomes...
2813 days ago
OPERA : Optimal Paired-End Read Assembler
...tigs/scaffolds assembled in a genome assembly project, in a proces...ciency etc.) and incorporated features that are important for scaffolding large genomes (mu...manuscript describing the new features and algorithms is available at Genome Biology. We look forward to get...2805 days ago
- Fermi is a de novo assembler with a particular focus on assembling Illumina short sequence reads from a mammal-sized genome....
2805 days ago
- These tutorials are written for hundreds of bioinformaticians trying to cope with large vol...ft in the world of sequencing. Merely five years back, genome sequ...ukaryotes used to be very expensive endeavor. To get a genome o...
2809 days ago
- The Sybil software package provides a primarily web-based front-end to comparative genome datasets warehoused in a chado relational data...Venter Institute (JCVI) and the Institute for Genome Scie...of research projects that involve comparative genome a...
2807 days ago
GAGE : Genome Assembly Gold-standard Evaluation
GAGE is an evaluation of the very latest large-scale genome assembly algorithms. We have organized this "bake-o...as an attempt to produce a realistic assessment of genome asse...ults of GAGE have now been published in the journal Genome R...2807 days ago
CGView - Circular Genome Viewer
GView is a Java package used to display and navigate bacterial genomes. GView is useful for producing high-quality genome maps for use in publications.... Users can interact with the genome using a powerful pan-and-zoom...e-write of CGView, a circular genome view...e or for application to other genome m...2795 days ago
BLAST Ring Image Generator (BRIG)
BRIG is a free cross-platform (Windows/Mac/Unix) application that can...risons between a large number of genomes, with a focus on handling genome assembly data. The applicatio...e.net/tracker/?group_id=328245. Features:...erage can be displayed for draft genomes; customized graphs and annotat...2784 days ago
- Murasaki is an anchor alignment program that is exteremely fast (17 CPU hours for whole Human x Mouse genome (...
2784 days ago
