Results for "genome overlapping features"
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Convenient conversions between genome assemblie. The liftover package makes it easy to remap genomic coordinates to a different genome assembly. More at https://github.com/aaronwolen/liftover https://www.bioconductor.org/help/workflows/liftOver/3003 days ago
- CrossMap is a program for convenient conversion of genome coordinates (or annotation files) between different...ED, GFF/GTF, VCF. CrossMap is designed to liftover genome coor...s not a program for aligning sequences to reference genome....
3003 days ago
- Spines Spines is a collection of software tools, develo...ed and used by the Vertebrate Genome Biology Group at the Broad In...for various analyses. It also features three sequence alignment pa...nstitute.org/science/programs/genome-biology/spines
3002 days ago
- flo - same species annotations lift over pipeline Lift over is the process of transferring annotations from one genome asse...lly lift over is done because there is a new, improved genome a...
3001 days ago
- NCBI Remap. This tool is conceptually similar to liftOver in that in manages conversions between a pair of genome asse...I for NCBI Remap. More at http://www.ncbi.nlm.nih.gov/genome/t...
3000 days ago
- Although centromeres are essential for life and are the subject of extensive research, centromere locations in yeast genomes are difficult to infer, and...diverse applications, including de novo genome asse...ons of all centromeres in a single yeast genome b...
2999 days ago
- HiCdat: a fast and easy-to-use Hi-C data analysis tool HiCda...is focussed on the analysis of larger structural features of chromosomes, their correlation to genomic and epigenomic features, and on comparative studies....
2999 days ago
UCSC Genome Browser and Blat software !
This directory contains Genome Browser and Blat application binaries built for standalone c...ewed by running the binary with no arguments. The UCSC Genome Brow...toXmlFor information about commercial licensing of the Genome B...2993 days ago
- This is a collection of libraries and high-quality end-user scripts for bioin...ipts for setting up databases of annotation, collecting annotated features, collecting genomic data relative to features, manipulating and analyzing d...
2992 days ago
- Generic Genome Browser Version 2: A Tutorial for Administrators This is an extensive tutorial to take you through the main features an...ase required!) Later we will show how to set up a genome size database using the berkele...
2992 days ago
