Results for "genome overlapping features"
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CovCal: Coverage / Read Count Calculator
Coverage / Read Count Calculator Calculate how much sequencing you need to hit a target de.... Instructions: set the read length/configuration and genome size...ere C = Coverage (X),L = Read length (bp), G = Haploid genome s...2176 days ago
- DarkHorse is a bioinformatic method for rapid, automated identification and ranking of phylogenetically atypical proteins on a genome-wide...ulate a lineage probability index (LPI) score for each genome p...
2884 days ago
- Horizontal gene transfer (HGT), the transfer of genetic material between organisms, is crucial for genetic innovation and the evolution of genome arch...ancestral (vertically derived) genes in its recipient genome....
2884 days ago
- Reads simulator Wgsim is a small tool for simulating sequence reads from a reference genome. It is able to simulate diploid genomes with SNPs and insertion/deletion (INDEL) polymorphisms, and simulate reads with uni...
2883 days ago
- Recent studies of the human genome have indicated that regulatory elements (e.g. promoters and e...s for mapping interactions between DNA regions, e.g., ChIA-PET and HiC, can generate genome-w...
2879 days ago
- CSBB is a command line based bioinformatics suite to analyze biological data acquired through va...cal tasks like performing upper-quantile normalization on expression data or convert genome w...
2877 days ago
Bioinformatics tools and software
USEARCH >Extreme high-throughput sequence analysis. Orders of magnitude faster than BLAS...gt;Chimeric sequence detection. PILER >De novo genome repe...;PILER-CR >Detection of CRISPR repeats in bacterial genomes....2871 days ago
- Scarpa is a stand-alone scaffolding tool for NGS data. It can be used together with virtually any genome asse...y NGS read mapper that supports SAM format. Other features include support for multiple...
2863 days ago
- Function WiseScaffolder is a stand-alone semi-automatic application for genome scaffolding o...
2863 days ago
- Microbiome analysis using a single application MEGAN6 is a comprehensive toolbox for in...nbsp;The software is: Easy to use. MEGAN6 is a single application and all features are available through menus,...
2851 days ago
