Results for "go"

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  • Redundans

    Redundans pipeline assists an assembly of heterozygous genomes.Program takes as input assembled...or mate pairs sequencing libraries and returns scaffolded homozygous genome assembly, that shoul...

    2814 days ago

  • CIRCOS Visualize !!

    ...If you are using order, size and color rows/columns in combination they must appear in that order. Need help? Post questions to the Circos Google Group. http://mkweb.bcgs...

    2813 days ago

  • NGS Tutorial

    ...To get a genome of interest sequenced, hundreds of scientists had to raise funds together by writing a joint white-paper and petitioning to various government agencies. The tasks o...

    2810 days ago

  • GAGE : Genome Assembly Gold-standard Evaluation

    GAGE is an evaluation of the very latest large-scale genome assembly algorithms. We have organized this "b...rch: GAGE: A critical evaluation of genome assemblies and assembly algorithms. http://genome.cshlp.o...

    2808 days ago

  • OPERA : Optimal Paired-End Read Assembler

    ...own as Scaffolding. OPERA is based on an exact algorithm that is guaranteed to mi....0 onwards) including refinements to its basic algorithm (to reduce local errors,...The manuscript describing the new features and algorithms is available at Ge...

    2806 days ago

  • FERMI

    ...the role of a typical assembler, fermi also aims to preserve heterozygotes which are often collapsed by other assemblers. Its ultimate goal is to find a minimal set of...

    2806 days ago

  • CGView - Circular Genome Viewer

    ...f some of the images GView can produce, see the Image Gallery. GView is a re-write of CGView, a circular genome viewer written by Paul Stothard. The goal of GView is to provide grea...

    2796 days ago

  • GeneBreak: a tool to systematically identify genes recurrently affected by the genomic location of chromosomal CNA-associated breaks by a genome-wide approach

    ...A-associated breaks that were previously pinpointed by the segmentation algorithm that was applied to obta...n is integrated to reveal recurrent breakpoint events. This easy-to-use algorithm, ‘GeneBreak’, is impleme...

    2165 days ago

  • MIRO : miRNA omics

    ...reference genomes using one of four different mappers, create differential gene (miRNA) expression profiles and cluster reads using one of several algorithm. MIRO output is furtherm...

    2781 days ago

  • VirMet

    ...covplot plot coverage for a specific organism A short help is obtained with virmet subcommand -h. More at https://github.com/ozagordi/VirMet...

    2775 days ago