Results for "historic DNA"
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Fermi is a de novo assembler with a particular focus on assembling Illumina short...raw reads.Fermi follows the overlap-layout-consensus paradigm and uses the FM-DNA-index (FMD-index) as the...2809 days ago
- DECIPHER is a software toolset that can be used to maintain, analyze, and decipher large amounts of DNA sequence data. To install DEC...
2787 days ago
- Murasaki is an anchor alignment program that is exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 35 wall minutes), or 8 mammals in 21 C...
2787 days ago
- Development of cancer is driven by somatic alterations, including numerical and structu...somal CNA-associated breaks by a genome-wide approach, which can be applied to DNA copy number data obtained by...
2167 days ago
- Metagenomics sequencing projects collect samples of DNA from uncharacterized environments that may contain hundreds or even...ch uses interpolated Markov models (IMMs) to taxonomically classify DNA sequences, can accurately cla...
2777 days ago
- HybPiper was designed for targeted sequence capture, in which DNA sequencing libraries are enriched for gene regions of interest,...tools in order to extract target sequences from high-throughput DNA sequencing reads. Targeted b...
2753 days ago
- SGA is a de novo genome assembler based on the concept of string graphs. The major goal...ry memory efficient, which is achieved by using a compressed representation of DNA sequence reads. More at htt...
2719 days ago
- The automated reconstruction of genome sequences in ancient genome analysis is a multif...rt tools for each step as well as new complementary tools tailored for ancient DNA data within a single integrat...
2716 days ago
- LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a genome Indica...Use sequence quality data properly. Compare DNA to proteins, with frameshifts...
2707 days ago
Finding Patterns in Biological Sequences
In this report we provide an overview of known techniques for discovery of patterns of biological sequences (DNA and proteins). We also provid...2704 days ago
