Results for "k-mers"
Comments
Comment on "Sibelia: A comparative genomics tool"
...------------------ Algorithm of "Sibelia" depends on presence of solid k-mers within syntenic regions. If...At each stage "Sibelia" constructs so called de Bruijn graph, graph of K-mers that occur in the genome, an...1336 days ago
Comment on "Estimate Genome Size"
# count k-mers (see jellyfish documentation for options) gzip -dc reads1.fastq.gz reads2.fastq.gz | jellyfish count -m 31 -o fastq.counts -C -s 10000000000 -U 500 -t 30 /d...1949 days ago
- ...contiguous sequences PREFIX_contigBubble.fa: merged and removed bubble sequences PREFIX_kmerFrq.tsv : occurrence distribution of k-mers(k is specified by -k option)...
2850 days ago
