Results for "kallisto"
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Modular, efficient and constant-memory single-cell RNA-seq preprocessing
With kallisto | bustools you can Generate a cell...eports from single-cell RNA-seq data The kallisto | bustools workflow is d...1). Documentation and tutorials for the kallisto bustools workflow are availab...1120 days ago
kallisto: a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data
kallisto is a program for quantifying abundances of tr...nt. On benchmarks with standard RNA-Seq data, kallisto can quantify 30 million...ey information needed for quantification, and kallisto is therefore not only fa...1939 days ago
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Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-seq data (uses pseudoalignm...ead compatibility with targets) Software (C++) https://pachterlab.github.io/kallisto/ Sailfish Estimation of iso...2365 days ago
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- kallisto can process either single-end o...iles represented as pairs, e.g. kallisto quant -i index -o output pair...any number of FASTQ files, e.g kallisto quant -i index -o output --si...dance estimates. Alternatively, kallisto h5dump can be used to ou...
1355 days ago
