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Results for "masked"

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• • Rahul Nayak@rahul

  

  Convert masked genome to N letters. $ perl -pe '/^[^>]/ and $_=~ s/[a-z]/N/g' genomic.fna > genomic.N-masked.fna #Genome #Masked #N #Convert

  Tags: Genome, Masked, N, Convert

  2538 days ago

• • Jit@jit.aber

  

  RePS: Repeat-masked Phrap with scaffolding, a WGS sequence assembler

  RePS (Repeat-masked Phrap with scaffolding), a WGS sequence assembler, that explicitly identifies exact kmer repeats from the shotgun data and removes them prior to the assembly. The established software Phrap is used to compute meaningful error probabilities for each base. Clone-end-pairing info...

  Tags: RePS, Repeat, masked, Phrap, scaffolding, WGS, sequence, assembler

  1598 days ago