Unicycler: Hybrid assembly pipeline for bacterial genomes
...sets where it functions as a SPAdes-optimiser. It can also assembly long-read-only sets (PacBio or Nanopore) where it runs a miniasm+Racon pipeline. For the...2361 days ago
miniasm: very fast OLC-based de novo assembler for noisy long reads
...t from mainstream assemblers, miniasm does not have a consensus ste...the raw input reads. So far miniasm is in early development stage...used, not the whole dataset), miniasm finishes the assembly, includ...rrectors and consensus tools, miniasm may also be useful to produce...2344 days ago
Minipolish: A tool for Racon polishing of miniasm assemblies
Miniasm is a great long-read assembly tool: straight-...on FASTA files, not the GFA graphs that miniasm makes. That's where Minipoli...a single command, it will use Racon to polish up a miniasm assembly, while keeping the a...1608 days ago