Results for "minimap"
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Comment on "Run miniasm assembler on nanopore reads !"
minimap2 –x ava-ont \ ../../trimming_practical/nan...anofilt/nanofilt_trimmed.fastq \ | gzip -1 > ./minimap.paf.gz miniasm -f \ ../...ing_practical/nanofilt/nanofilt_trimmed.fastq \ ./minimap.paf.gz > miniasm.gfa &n...840 days ago
Comment on "Run miniasm assembler on nanopore reads !"
...w) for analyzing PacBio data. Minimap only accepts two FASTQ files...single file prior to running minimap. minimap2 -x ava-pb -t 23 \...cat.fastq /home/data/20170911_minimap2_pacbio_oly.paf > /home/da....fastq \ 20170918_oly_pacbio_minimap_mappings.paf \ 20170918_oly_...2211 days ago
Comment on "Run miniasm assembler on nanopore reads !"
I followed this to assemble the genome using ONT (nanopore reads) Minimap and miniasm are ultrafast tools f....e. full of errors) We start with an all against all comparison: minimap -Sw5 -L100 -m0 -t8 reads.fq r...2219 days ago
