2728 days ago
2705 days ago
Many-Core Engine (MCE) for Perl example
.... MCE::Relay Enables workers to receive and pass on information orderly with zero involvement by the manager process while running. MCE MODELS The models take Many-Core Engine to a ne...2666 days ago
fineSTRUCTURE v2 & GLOBETROTTER
...oPainter. Download from the Downloads page. AdmixturePainting, A set of R tools to inmterpret the results of ADMIXTURE and STRUCTURE-like mixture models. RADpainter, finestructure a...2653 days ago
2649 days ago
ChromHMM: Chromatin state discovery and characterization
...de novo the major re-occuring combinatorial and spatial patterns of marks. ChromHMM is based on a multivariate Hidden Markov Model that explicitly models the presence or absence of ea...2588 days ago
dbCAN: a web server and DataBase for automated Carbohydrate-active enzyme ANnotation
...ased on sequence similarities; dbCAN make all pre-computed data freely available to the public, including sequence alignments, hidden markov models (HMMs) and phylogenies o...2548 days ago
simNGS and simLibrary – Software for Simulating Next-Gen Sequencing Data
simNGS is software for simulating observations from Illumina sequencing machines using the statistical models behind the AYB base-calling software. By default, observations only incor...2365 days ago
2364 days ago
ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data
...w features include (i) building gene-based and supermatrix-based phylogenies using a single command, (ii) testing and visualizing evolutionary models, (iii) calculating distance...2282 days ago