Comment on "Sibelia: A comparative genomics tool"
...blocks In this case Sibelia doesn't compute the synteny blocks and doesn't ouput them, but can output the graph. For example, to get only non-modified compressed de Bruijn grahp f...1299 days ago
Comment on "Most Commonly used Awk by Bioinformatician"
I love awk but recommend you to try bioawk . Bioawk is a modified version of awk which will parse some common sequence formats. https://github.com/lh3/bioawk3695 days ago