Nemo – A stochastic, individual-base, genetically explicit simulation platform
A recombination map has been added for all multi-locus traits. The map positions (chromosomal) for neut...A new trait coding for (Bateson-)Dobzhansky-Muller incompatibility loci. Multi...2785 days ago
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Maq: Mapping and Assembly with Quality
Maq stands for Mapping and Assembly with Quality It builds...teps to try Maq. All you need is a reference sequence file in the FASTA format. Prepare a reference sequence (ref.fasta). Better a bacterial genome....2733 days ago
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CISA: Contig Integrator for Sequence Assembly
A plethora of algorithmic assemblers have been proposed for the de novo assembly of genomes, however, no individual a...optimal assembly. However, few efforts have been pursued to take advantage of multi...2710 days ago
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MeGAMerge: A tool to merge assembled contigs, long reads from metagenomic sequencing runs
MeGAMerge MeGAMerge (A tool to merge assembled contigs, lon...rapper/tool that can accept any number of sequence (FASTA) files containing assembled contigs of any length in Multi-FASTA format to produce an improved...2706 days ago