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• • Rahul Nayak@rahul

  

  My commonly used commands in Bioinformatics

  FYI, I've found it useful to use MUMmer to extract the specific changes that Racon makes, so I can evaluate them individually: minimap -t 24 assembly.fasta long_reads.fastq.gz | racon -t 24 long_reads.fastq.gz - assembly.fasta racon_assembly.fasta nucmer -p nucmer assembly.fasta racon_assembly....

  Tags: my, commands, ngs, genome

  2109 days ago