Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
Hidden Markov Models, the Viterbi Algorithm, and CpG Islands (in VB6) Prob...f housekeeping genes (which are essential for general cell functions) or ot...ls-viterbi-algorithm-cpg-islands-in-vb6/ Fore d...nt tutorial http://www.cs.ubc.ca/~murphyk/Software/HM...3823 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...ata management, and alignment software tools The Sequence Alignmen...78-9, 2009 PubMedCentral SAM format specification file Efficient s...:644 - 652, 2011. PubMed [The software is called Trinity, and is available on Sourceforge.] Comprehensive analysis o...-configured with a variety of software to...3778 days ago
List of bioinformatics open source projects/software.
Open source software is software that can be freely used, changed, a...ed (in modified or unmodified form) by anyone. Open source software is made by many people, and d...t. Followings are the OS bioinformatics projects/software : .NET Bio http://blog...https://www.openclinica.com/ software fo...3755 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools/resource with brief descri...ALF A Simulation Framework for Genome Evolution http://www.cbrg.e...fan Schneider. http://www.stanford.edu/group/hadlylab/ssc/index.html...m to reconstruct different isoforms and alternate splicing from RNA-...3735 days ago
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico Binding Site Prediction in Prote...proteins (CASTp) provides an online resource for locating, delineating and measurin...on and residue selection. The software provided can easily be i...ding site residue predictions for expert and non-expert users a...3742 days ago
Linux for bioinformatician !!!
Linux, free operating system for computers, provides several po...ith an ease. The field of bioinformatics relies heavily on Linux-based computers and software. Although most bioinformatics programs can be compile...ou to become an effective bioinformat...sheet at http://bioinformaticsonline.com/...3703 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them ar...vides an advanced environment for efficient sequence management and...ases implementing the BioMart software suite (http:// www.biomart.org). The package enables online retrieval of large amounts...3623 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and referen...data. Commercial next-gen-seq software that extends the CLCbio Main Workbench software. Includes SNP detection, CHiP..."anchors" into mini-contigs before assembly. Includes SNP detection,...France. MapNext - MapNext: A software to...3517 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
DEPARTMENT OF BIOTECHNOLOGY Centre For DNA Fingerprinting And Diagno...f Nutrition National Centre for Laboratory Animal Science F...Headquarters CCMB - Centre for Cellular & Molecular Biol...tre Jawaharlal Nehru Centre for Astronomy and Astrophysics...esearch National Centre for Softwa...2569 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and refer...data. Commercial next-gen-seq software that extends the CLCbio Main Workbench software. Includes SNP detection, CHiP...omatix - Integrated Solutions for Next Generation Sequencing data an...rance. * MapNext - MapNext: A software to...3241 days ago