List of bioinformatics open source projects/software.
.../ Haskell (programming language) BioJava http://biojava.org/wiki/Main_Page Java (programming language)...rg/ registry of web services BioPerl http://www.bioperl.org/wiki/Main_Page Perl language toolkit BioPH...3772 days ago
List of In-silico Binding Site Prediction Tools
...ing-site geometries can be used as an additional tool complementing elaborate manual inspections. McVol: http://www.bisb.uni-bayreuth.de/index.php?page=data/mcvol/mcvol This p...3759 days ago
A guide for complete R beginners !
...loads/bioinf/kerr/data.tsv Start R (type R on a Linux or Mac terminal, or find the starting link from PC) Getting More Help Project Home page http://www.r-project.org/...3376 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...vcftools, VarScan2, bambino, cmake, somaticsniper (User guide; workflow page) Input: tumor and normal rea...s with gene annotation features BioR Description: (Mayo Clinic) (Page last updated June 2015) Biolo...2924 days ago
2889 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
...iple gene list simultaneously. ------------ Home page:http://genescf.kandurilab.org.../documentation.php Report issues on Biostars or GitHub Project page ----------2887 days ago
Perl Special Vars Quick Reference
...ator. (Use a real multidimensional array instead.) Formats $% Page number for currently selected output channel. $= Current page length. $- Number of li...2659 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...rojects/lmat/ stringMLST k-mer-based tool for MLST directly from the genome sequencing reads Software (Python) http://jordan.biology.gatech.edu/page/software/stringMLST Taxonome...2386 days ago
Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
...mdash; output the contents of file less file — view file with page navigation head file &md...; you can read and write, and everyone else can only read - good for web pages chmod 755 file —...2296 days ago
Some useful Bioinformatics links
...http://seqanswers.com/forums/showthread.php?t=26721 samtools(1) manual page http://www.htslib.org/doc/sa...tid%3D52:cat_coding_algorithms_dot-plots%26Itemid%3D76 RepeatFinder Home Page http://www.cbcb.umd.edu/soft...2257 days ago