List of Bioinformatics Software Tools for Next Generation Sequencing
...space- separated format, VCF, pileup, HGVS Output: VCF, JSON, Statistics ABSOLUTE Description: (Broad Institute); can estimate purity and ploidy to compute absolute copy numb...2913 days ago
Frequent parameters for bioinformatics tools !
...; samtools mpileup (SNP detection) -uRI bcftools call (SNP detection) --variants-only --skip-variants indels --output-type v --ploidy 1 -c SNPsift filter...1290 days ago