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List of popular bioinformatics software/tools
In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.3958 days ago
Bioinformatics software for biologists in the genomics era
...e design principles need to be sensitive to the reality that comparatively small teams of biologists have historically developed some of the most popular biological software packages...3800 days ago
- ...or R. It’s free and open source, and works great on Windows, Mac, and Linux. The developers and expert trainers are the authors of several popular R packages, including ggplot2...
3430 days ago
- Online coding group for most of the programming languages. Code in almost all popular languages using Coding Ground. Edit, compile, execute and share your projects, 100% cloud. http://www.tutorialspoint.com/codingground.htm
3350 days ago
- ...nbsp; Updated to use samtools 1.1 and bcftools 1.2. Updated usage for bcftools.AboutSAMtools is a popular open-source tool used in next...
2886 days ago
- ...calling pipelines result in files containing large quantities of variant information. The variant call format (vcf) is an increasingly popular format for this data. The for...
2829 days ago
BIMA V3: an aligner customized for mate pair library sequencing
...points within reads increases mapping and alignment complexity. We describe an algorithm that is up to 20 times faster and 25% more accurate than popular NGS alignment programs when p...2712 days ago
SeqMule: Automated human exome/genome variants detection
SeqMule takes single-end or paird-end FASTQ or BAM files, generates a script consisting of more than 10 popular alignment, analysis tools and runs the script line by line. Users can c...2629 days ago
Enrichr: a comprehensive gene set enrichment analysis
Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of the tools in this domain called...2578 days ago
AVID: A Global Alignment Program
...nt of large syntenic genomic regions and whole genome human/mouse alignments. We have also performed a quantitative comparison of AVID with other popular alignment tools. To this end,...2551 days ago
