Results for "quantification"
Top-level pages
List of Bioinformatics Software Tools for Next Generation Sequencing
...microarrays (Affymetrix, Illumina) and text files Supports custom genome builds and annotation databases Performs base trimming, alignment, quantification, quality analysis, statistics...2901 days ago
Genome Assembly Tools and Software - PART1 !!
...rence genome. Rnnotator 3.5.0 – de novo Transcriptome Assembly pipeline from stranded RNA-Seq reads Comprehensive annotation and quantification of transcriptomes are outstan...2678 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-seq data (uses pseudoalign...u.edu/~ckingsf/software/sailfish/ Salmon Quantification of the expression of transcri...e-lab.github.io/salmon/ RNA-Skim RNA-seq quantification at transcript-level (partitio...2363 days ago
- ...used in all cases. We review all of the major steps in RNA-seq data analysis, including experimental design, quality control, read alignment, quantification of gene and transcript levels...
2343 days ago
