Results for "scaffolds"
Comments
Comment on "REAPR: a universal tool for genome assembly evaluation"
...reads. It is heavily based on too low span coverage, or reads mapping too far or too close to each other. The program will also break up contigs/scaffolds at spurious sites to form sma...1345 days ago
Comment on "Perl script to count number of Ns in a multifasta file !"
...fasta file. (base) ? output_2_test git:(master) ? more scaffolds.fasta | grep -Ho N * | uniq -c 12 draft_summary.info:N 1035948 scaffolds.fasta:N ...1571 days ago
Comment on "RACA: Reference-Assisted Chromosome Assembly"
Chromosomer – a reference-based genome arrangement tool, which rapidly builds chromosomes from genome contigs or scaffolds using their alignments to a reference genome of a close...2779 days ago
- ...d (mate-pair) data and constructs scaffolds. Finally, paired-end reads localized on gaps in scaffolds are assembled and gaps are cl...rder of contigs and construct scaffolds. INPUT OPTIONS...mber) and makes scaffolds, then decreases the threshold...
2807 days ago
