CNIDARIA: fast, reference-free phylogenomic clustering
...ement for a range of applications. Reference-free methods analyse unprocessed sequencing data without relying on prior knowledge, but these do not scale to arbitrarily large genomes...2876 days ago
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Comparative genomics educational material and papers bookmarks
...ed earlier using a slightly lower resolution (500 kilobases (kb)), indicating that both lineages evolved with an average rate of ~2.1 large-scale rearrangements per million ye...2730 days ago
GAGE : Genome Assembly Gold-standard Evaluation
GAGE is an evaluation of the very latest large-scale genome assembly algorithms. We have organized this "bake-off" as an attempt to produce a realistic assessment of genome assembly...2794 days ago
Nemo – A stochastic, individual-base, genetically explicit simulation platform
...) can now be specified explicitly, or set at random. The map can hold an unlimited number of loci of different types jointly, at any recombination scale (cM or lower). The effects of...2769 days ago
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FSA: Fast Statistical Alignment
...ds for Optimization and Control of Multiple Alignments." FSA brings the high accuracies previously available only for small-scale analyses of proteins or RNAs to large-scale problems such as aligning tho...2642 days ago
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Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...17/ PRNewswire/ Strand NGS now supports large scale RNA- and small-RNA-Seq and Un...on sequencing (NGS). The first theme is large-scale RNA-Seq data analysis. Curren...iants at low concentrations. In RNA-Seq, large-scale and UMI support can be used i...2383 days ago