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Results for "short reads mapping"

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• • Rahul Agarwal@raag

  

  Bioinformatics approach to Boar Taint

  ...were done in Illumina HiSeq2000 to >10X average coverage. Short reads generated from these samples...aplotypes in close linkage disequilibrium with QTLs and fine mapping of QTLs through association mapping of genotyped SNPs.  &nb...

  3790 days ago

• • Jit@jit.aber

  

  Randomness and Probability

  Randomness and Probability Randomness and probability are two differnet concepts: p...s the object to be measured by probability. For example, probability is a mapping from randomness to the real n...

  1615 days ago

• • Jit@jit.aber

  

  Download blasr 1.3 version

  ...PERA-LG_v2.0.5/bin/preprocess_reads.pl" and have the following er...ing the SA coordinates of the reads using BWA aln...[Thu Jun 14 1...am > FALCON-Unzip-Scaff.bamMapping long-reads using blasr.../home/urbe/Tools/...asr: Permission deniedSorting mapping results...sort -k1,1 -k9,9g F...

  2152 days ago

• • BioStar@biostar

  

  Evaluation of genome assembly software based on long reads

  TGS technologies have been used to produce highly accurate de novo assemblies of hundreds of microbi...DBG2OLC, Spades and Cerulean. The first 8 software use only long reads, while the 3 last software can merge long and short reads

  1921 days ago

• • Abhimanyu Singh@abhimanyu

  

  Spades tutorial PDF

  SPAdes—St. Petersburg genome Assembler—was originally developed for de novo assembly of genome seq...ded to enable assembly of IonTorrent data, as well as hybrid assembly from short and long reads (...

  825 days ago