Results for "short reads mapping"
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Comment on "LAMSA: fast split read alignment with long approximate matches"
...s: -t --thread [INT] Number of threads. [1] -l --seed-len [INT] Leng...GEM-mapper's fastest mode(--fast-mapping=0). [false] Scoring option...mum error rate of mismatch within reads. [0.04] -T --read-type [STR]...). [stdout] -h --help Print this short usage. -H --HELP Print a detail...2123 days ago
- ...(Lib_id=INT1) that infer short insert size (< INT2) are...imation. -s INT : Mapping seed length (default 32)...Map paired-end(mate-pair) reads on scaffolds, assemble reads lo...THER OPTIONS -s INT : Mapping seed length (default 32)...
2799 days ago
Comment on "List of popular bioinformatics software/tools"
TopHat http://tophat.cbcb.umd.edu/manual.shtml is a program that aligns RNA-Seq reads to a genome in order to identify exon-exon splice junctions. It is built on the ultrafast short read mapping program Bowtie.3649 days ago
