2966 days ago
YASS :: genomic similarity search tool
...his genomic search tool uses multiple transition constrained spaced seeds that enable to search more fuzzy repeats, as non-coding DNA/RNA. Another simple, but interesting feature is t...2940 days ago
RCircos: an R package for Circos 2D track plots
RCircos package provides a simple and flexible way to make Circos 2D track plots with R and could be easily integrated into other R data processing and graphic manipulation pipeline...2922 days ago
VAGUE:Velvet Assembler Graphical Front End
...s a GUI for the Velvet de novo assembler. The command line version of Velvet can be complicated for beginners to use, but VAGUE makes it clear and simple More at http://www.vicb...2642 days ago
BLAST Ring Image Generator (BRIG)
...central reference sequence and other sequences as concentric rings. BRIG will perform all BLAST comparisons and file parsing automatically via a simple GUI. Contig boundaries and r...2789 days ago
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2677 days ago
Many-Core Engine (MCE) for Perl example
...es for use with MCE. MCE::Candy Provides a collection of sugar methods and output iterators for preserving output order. MCE::Mutex Provides a simple semaphore implementation supp...2666 days ago
2653 days ago