Comment on "List of non-commercial NGS genotype-calling software"
Delly – Structural variant discovery by integrated paired-end an...lumpy: a general probabilistic framework for structural variant discovery. [ paper-2014 ] manta – Structural variant and indel caller for...1156 days ago
Comment on "List of genome announcement, notes and reporting journals"
Computational and Structural Biotechnology Journal for bioinformatics tool publication1240 days ago
Comment on "Coronavirus Resources !"
SARS-CoV-2 protein structures, highlighting important structural features to support the development of treatments and vaccines. https://www.covid19dataportal.org/structures?db=structures1437 days ago
Comment on "Genome in a Bottle (GIAB) Consortium"
...es/giab/release/ Draft benchmarks for difficult variants and regions:Structural variants: Currently avai...alysis Team is focused on establishing benchmark large indel and structural variant calls, as well as cal...1574 days ago
Comment on "Structural variation: the hidden genomic treasure"
Structural variant detection and association testing https://github.com/zeeev/wham2641 days ago
Comment on "Structural variation: the hidden genomic treasure"
I like this tool GRIDSS: the genomic rearrangement identification software suite. A high-speed next-gen sequencing structural variation caller. GRIDSS calls variants based on...2716 days ago
Comment on "Computer simulation of genetic mechanism !!"
Thanks for such a useful list of tool for simulation studies. I guess you forgot to add RSVSim: an R/Bioconductor package for the simulation of structural variations ( https://www.bioconductor.org/packages/release/bioc/html/RSVSim.html ) in the list.2988 days ago
Comment on "The Future of Personalized Medicine"
This paper http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1003554 explain the Structural Systems Pharmacology to Study Complex Diseases and Personalized Medicine in detail.3641 days ago