Results for "test"
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Swabs to Genomes: A Comprehensive Workflow
...ics can pose a significant barrier to entry for many who may be interested in microbial genomics. The objective of the present study was to design, test, troubleshoot, and publish a...3569 days ago
PEAR: a fast and accurate Illumina Paired-End reAd mergeR
...R evaluates all possible paired-end read overlaps and without requiring the target fragment size as input. In addition, it implements a statistical test for minimizing false-positive...2964 days ago
- ...useful not only for large-scalede novo predictions of horizontally transferred proteins, but can also serve as an independent quality control test for potential horizontal tran...
2887 days ago
Method in Comparative genomics !!
...ure to conserve the reading frame of functional proteins and developed a test for gene identification with high sensitivity and specificity. We used this test to revisit the genome of S. c...2747 days ago
- Redundans pipeline assists an assembly of heterozygous genomes.Program takes as input assembled contigs, paired-end and/or mate pairs sequencing librari...
2816 days ago
- ...also help in the detection of sequencing and sample preparation issues, testing of aligners and variant-ca...m whole genome aligners such as MUMmer. Therefore, Ribbon can be used to test assembly algorithms or inspec...
2766 days ago
- ...and then follow the instructions for opening the download package. Once you have done this, you will be ready to try some example analyses on the test data that are provided with t...
2760 days ago
- ...nce functional elements are differentially active in different cell types, and hence can expose tissue-specific signals of enrichment for the given test DMP set. This can reveal the...
2759 days ago
- ...ds of three major commercial next-generation sequencing platforms: Illumina's Solexa, Roche's 454 and Applied Biosystems' SOLiD. ART can be used to test or benchmark a variety of met...
2753 days ago
- ...ome and has a full coverage. In this paper, we describe our approach and test its implementation called REC...We made our software publicly available on sourceforge. Conclusion. Our tests show that on closely related...
2731 days ago
