Results for "tools%20%21"

Bio-Scripts

  • Install Parrot Virtual Machine !

    #Parrot is a virtual machine designed to efficiently compile and execute bytecode for dynamic languages jit@jit-HP-Pro-3335-MT:~/Downloads/parrot-8.1.0$ wget ftp://ftp...

    1550 days ago

  • Long reads mapper bash script !

    #!/bin/bash #only for LONG READS mapping #USAGE: runMapper.sh minimap2 ref.fa reads.fa/fq 48 ont echo -e "This is a bash scrip to map your long reads and make it vi...

    2136 days ago

  • Running Transrate !

    ➜ BorisTrinityAssembly /home/urbe/Tools/transrate-1.0.3-linux-x86_64/transrate _ _ | |_ _ __ __ _ _ __...

    2136 days ago

  • Installing Porechop on Ubuntu !

    ➜ Tools git:(master) ✗ git clone https://github.com/rrwick/Porechop.git Cloning into 'Porechop'... remote: Counting objects: 1579, done. remote: Total 1579 (delta 0),...

    2119 days ago

  • Running REAPR !

    set -e echo "Running reapr version 1.0.18 pipeline:" echo "/home/urbe/Tools/Reapr_1.0.18/reapr WadinetaGapFilled.gapfilled.iteration1.fa out.smaltmap.bam out.pipeline p...

    2112 days ago

  • Installing NextSV on Ubuntu !

    ➜ Tools git:(master) ✗ git clone https://github.com/Nextomics/nextsv.git Cloning into 'nextsv'... remote: Counting objects: 369, done. remote: Total 369 (delta 0), r...

    2112 days ago

  • Downloading GATK !

    jitendra@jitendra-UNLOCK-INSTALL[SNP] wget https://github.com/broadinstitute/gatk/releases/download/4.0.2.1/gatk-4.0.2.1.zip --2018-08-30 11:47:20-- https://github.com/...

    2088 days ago

  • Update zsh on Ubuntu !

    ➜ upgrade_oh_my_zsh Updating Oh My Zsh remote: Counting objects: 484, done. remote: Compressing objects: 100% (243/243), done. remote: Total 484 (delta 290), reused 3...

    2088 days ago

  • Installing pb-assembly on Linux !

    [jnarayan@hmem00 ~]$ module avail -------------------------------------------------------- /usr/share/Modules/modulefiles --------------------------------------------...

    2047 days ago

  • Installing nupack3.0.6

    #http://www.nupack.org/downloads/source ➜ tools git:(master) ✗ cd nupack3.0.6 ➜ nupack3.0.6 git:(master) ✗ make make -C src/ make[1]: Entering directory '/home/urbe...

    2039 days ago