2887 days ago
2887 days ago
HGT-Finder: A New Tool for Horizontal Gene Transfer Finding and Application to Aspergillus genomes
...oth prokaryotes and eukaryotes, (ii) can report a statistical P value for each gene to indicate how likely it is to be horizontally transferred, and (iii) is fully automat...2313 days ago
HTTDB - Horizontally transferred transposable elements database
...enon is called Horizontal Transposons Transfer. HTT was first discovered by Daniels et al. (1984) when analysing a P element that was transferred from Drosophila willisto...2307 days ago
S-plot2: creates an interactive, two-dimensional heatmap of sequences
...ions of interest within the heatmap. This facilitates the investigation of quickly evolving coding regions, novel coding regions, and laterally transferred elements. http://www.putonti...2059 days ago
S-plot2: Rapid Visual and Statistical Analysis of Genomic Sequences
...ions of interest within the heatmap. This facilitates the investigation of quickly evolving coding regions, novel coding regions, and laterally transferred elements.2055 days ago
alien_index : identify potential contaminants or horizontally transferred genes in transcriptomes.
identify potential contaminants or horizontally transferred genes in transcriptomes. algorithm is based on alogorithm described in the following: Gladyshev, Eugene A., Matthew Meselson...1567 days ago
PaReBrick: PArallel REarrangements and BReaks identification toolkit
...ents by their parallelism score. The tool provides diagrams of the neighbors for each block of interest, allowing the detection of horizontally transferred blocks or their extra copies...953 days ago