Results for "variant%20calling"
Bio-Scripts
jitendra@jitendra-UNLOCK-INSTALL[SNP] wget https://github.com/broadinstitute/gatk/releases/download/4.0.2.1/gatk-4.0.2.1.zip --2018-08-30 11:47:20-- https://github.com/bro...2071 days ago
- library(vcfR) # Input the files. vcf
2056 days ago
Installing Platypus on Ubuntu !
(py27) ➜ Tools git:(master) ✗ git clone https://github.com/andyrimmer/Platypus.git Cloning into 'Platypus'... remote: Enumerating objects: 1394, done...2015 days ago
Corona variant calling steps !
#!/bin/bash FILE_PATH="data/trimmed_fastq_small/" find "$FILE_PATH" -name "*.fasta" | while IFS= read -r my_file do filename=$(basename "$my_file") basename=$(b...1041 days ago
- #GATK is a toolkit developed by the broad institute focused primarily on variant discovery and genotyping. It is open source, hosted on github, and available under a BSD 3-c...
808 days ago
