2779 days ago
2759 days ago
2746 days ago
2709 days ago
BIMA V3: an aligner customized for mate pair library sequencing
...is an effective and economical method for detecting genomic structural variants and chromosomal abnormalitie...ed-end read contamination, chimeras, etc.), and presence of structural variant breakpoints within reads incr...2705 days ago
2657 days ago
ConPADE: Genome Assembly Ploidy Estimation from Next-Generation Sequencing Data
...rding errors in sequencing. The method can be used for whole genome shotgun (WGS) sequencing data. They also show applicability of the method for variant calling and allele dosage est...2633 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...NA-Seq. UMI support in Strand NGS is end-to-end, spanning alignment to variant calling in DNA-Seq, and align...FFPE samples, UMI support in DNA-Seq enables the detection of somatic variants at low concentrations. In RN...2392 days ago
PBSuite: Software for Long-Read Sequencing Data from PacBio
...ntral.com/1471-2105/15/180/abstractPBHoney is an implementation of two variant-identification approaches des...iscordance and soft-clipped tails of long reads to identify structural variants.2630 days ago
Pacbio Long Reads Compatible Software and Tools
...PacBio data? Email us. Software categories: De novo assembly Structural Variations Detection Reference-based alignment Consensus and variant calling RNA analysis Epigen...2614 days ago