TMAP - torrent mapping alignment program General Notes
TMAP - torrent mapping alignment program General Notes TMAP is a fast and accurate a...it git submodule update https://github.com/iontorrent/TS/tree/master/Analysis/TMAP2602 days ago
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
DnaSP is a software package for a comprehensive analysis of DNA polymorphism data. Version 5 implements a number of new features and analytical methods allowing extensive DNA polymorphism analy...2658 days ago
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ConPADE: Genome Assembly Ploidy Estimation from Next-Generation Sequencing Data
ConPADE (Contig Ploidy and Allele Dosage Estimation), a probabilistic method that estimates the ploidy of any given...shotgun (WGS) sequencing data. They also show applicability of the method for variant...2640 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...includes confounding variable analysis to eliminate technical effec...to-end, spanning alignment to variant calling in DNA-Seq, and alignm...bles the detection of somatic variants at low concentrations. In RNA...cy and efficiency of NGS data analysis. Customers can look forward t...2399 days ago
PBSuite: Software for Long-Read Sequencing Data from PacBio
PBJelly - the genome upgrading tool. PBHoney - the structural variation discovery t...15/180/abstractPBHoney is an implementation of two variant-identification approaches des...clipped tails of long reads to identify structural variants...2637 days ago
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SeqMule: Automated human exome/genome variants detection
SeqMule takes single-end or paird-end FASTQ or BAM files, generates a script consisting of more than 10 popular alignment, analysis tools and runs the script lin...2629 days ago