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Install fastqc using conda !
By Jit 1213 days ago
(JitMetaENV) ➜ JitMeta conda install -c bioconda fastqc
Collecting package metadata (current_repodata.json): done
Solving environment: done
==> WARNING: A newer version of conda exists. <==
current version: 4.9.0
latest version: 4.9.2
Please update conda by running
$ conda update -n base -c defaults conda
## Package Plan ##
environment location: /home/urbe/anaconda3/envs/JitMetaENV
added / updated specs:
- fastqc
The following packages will be downloaded:
package | build
---------------------------|-----------------
fastqc-0.11.9 | 0 9.7 MB bioconda
font-ttf-dejavu-sans-mono-2.37| hab24e00_0 388 KB conda-forge
fontconfig-2.13.1 | h736d332_1003 319 KB conda-forge
freetype-2.10.4 | h7ca028e_0 912 KB conda-forge
libpng-1.6.37 | h21135ba_2 306 KB conda-forge
libuuid-2.32.1 | h7f98852_1000 28 KB conda-forge
openjdk-10.0.2 | h14c3975_1015 189.2 MB conda-forge
------------------------------------------------------------
Total: 200.8 MB
The following NEW packages will be INSTALLED:
fastqc bioconda/noarch::fastqc-0.11.9-0
font-ttf-dejavu-s~ conda-forge/noarch::font-ttf-dejavu-sans-mono-2.37-hab24e00_0
fontconfig conda-forge/linux-64::fontconfig-2.13.1-h736d332_1003
freetype conda-forge/linux-64::freetype-2.10.4-h7ca028e_0
libpng conda-forge/linux-64::libpng-1.6.37-h21135ba_2
libuuid conda-forge/linux-64::libuuid-2.32.1-h7f98852_1000
openjdk conda-forge/linux-64::openjdk-10.0.2-h14c3975_1015
Proceed ([y]/n)?
