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Install fastqc using conda !

  • Public
By Jit 1418 days ago
(JitMetaENV) ➜ JitMeta conda install -c bioconda fastqc Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists. <== current version: 4.9.0 latest version: 4.9.2 Please update conda by running $ conda update -n base -c defaults conda ## Package Plan ## environment location: /home/urbe/anaconda3/envs/JitMetaENV added / updated specs: - fastqc The following packages will be downloaded: package | build ---------------------------|----------------- fastqc-0.11.9 | 0 9.7 MB bioconda font-ttf-dejavu-sans-mono-2.37| hab24e00_0 388 KB conda-forge fontconfig-2.13.1 | h736d332_1003 319 KB conda-forge freetype-2.10.4 | h7ca028e_0 912 KB conda-forge libpng-1.6.37 | h21135ba_2 306 KB conda-forge libuuid-2.32.1 | h7f98852_1000 28 KB conda-forge openjdk-10.0.2 | h14c3975_1015 189.2 MB conda-forge ------------------------------------------------------------ Total: 200.8 MB The following NEW packages will be INSTALLED: fastqc bioconda/noarch::fastqc-0.11.9-0 font-ttf-dejavu-s~ conda-forge/noarch::font-ttf-dejavu-sans-mono-2.37-hab24e00_0 fontconfig conda-forge/linux-64::fontconfig-2.13.1-h736d332_1003 freetype conda-forge/linux-64::freetype-2.10.4-h7ca028e_0 libpng conda-forge/linux-64::libpng-1.6.37-h21135ba_2 libuuid conda-forge/linux-64::libuuid-2.32.1-h7f98852_1000 openjdk conda-forge/linux-64::openjdk-10.0.2-h14c3975_1015 Proceed ([y]/n)?