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Install spades using conda !
By Jit 1208 days ago
(JitMetaENV) ➜ fastQC_out conda install -c bioconda spades
Collecting package metadata (current_repodata.json): done
Solving environment: done
==> WARNING: A newer version of conda exists. <==
current version: 4.9.0
latest version: 4.9.2
Please update conda by running
$ conda update -n base -c defaults conda
## Package Plan ##
environment location: /home/urbe/anaconda3/envs/JitMetaENV
added / updated specs:
- spades
The following packages will be downloaded:
package | build
---------------------------|-----------------
bzip2-1.0.8 | h7f98852_4 484 KB conda-forge
spades-3.14.1 | h2d02072_0 12.7 MB bioconda
------------------------------------------------------------
Total: 13.2 MB
The following NEW packages will be INSTALLED:
bzip2 conda-forge/linux-64::bzip2-1.0.8-h7f98852_4
llvm-openmp conda-forge/linux-64::llvm-openmp-8.0.1-hc9558a2_0
openmp conda-forge/linux-64::openmp-8.0.1-0
spades bioconda/linux-64::spades-3.14.1-h2d02072_0
Proceed ([y]/n)?
