Results for "BLAST"

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  • NCBI PSI-BLAST Tutorial

    http:--www.biotechnology.jhu.edu- Tutorial for PSI-BLAST, an extension of BLAST that uses matrix algebra. BLAST is a cornerstone bioinformatics tool at NCBI. BLAST is the Basic Local Alignment Search tool and will protein and DNA sequences that are related to a sequence that the user provides.

    Tags: PSI Blast, BLAST, NCBI, Alignment, Search, Sequence

    1457 days ago

  • Bioinformatics 101 - Running BLAST

    How to format the database for BLAST, run the command, view the output file, and use BioPerl and Perl to parse the output. By David Francis, Ohio State University. Delivered live at the Tomato Disease Workshop 2010. For more information, please visit http://www.extension.org/pages/32521/bioinform...

    Tags: BLAST, Perl, BioPerl, Bioinformatics

    1445 days ago

  • NCBI PSI-BLAST Tutorial

    http:--www.biotechnology.jhu.edu- Tutorial for PSI-BLAST, an extension of BLAST that uses matrix algebra. BLAST is a cornerstone bioinformatics tool at NCBI. BLAST is the Basic Local Alignment Search tool and will protein and DNA sequences that are related to a sequence that the user provides.

    Tags: PSI-BLAST, Bioinformatics, BLAST

    1445 days ago

  • Demo 4: Using BLAST/BLAT in Ensembl

    We demonstrate the BLAST/BLAT tool in Ensembl. Search for a sequence in Ensembl, and identify hits to the genome, or to genes, with this tool.

    Tags: BLAST, BLAT, EnsEMBL

    1439 days ago

  • BLAST

    Dr. Rob Edwards describes how BLAST works

    Tags: BLAST, Scores, Parameters, E-Values

    1424 days ago