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Results for "Bash"

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• • Jit@jit.aber

  

  Advanced Bash-Scripting Guide

  This tutorial assumes no previous knowledge of scripting or programming, yet progresses rapidly toward an intermediate/advanced level of instruction . . . all the while sneaking in little nuggets of UNIX® wisdom and lore. It serves as a textbook, a manual for self-study, and as a reference an...

  Tags: Bioinformatics, Guide, Tutorial, Genome, Script, Bash

  2990 days ago

• • Jit@jit.aber

  

  Genome Browser : GBrowse

  Generic Genome Browser Version 2: A Tutorial for Administrators This is an extensive tutorial to take you through the main features and gotchas of configuring GBrowse as a server. This tutorial assumes that you have successfully set up Perl, GD, BioPerl and the other GBrowse dependencies. If you...

  Tags: Bioinformatics, Guide, Tutorial, Genome, Script, Bash, GBrowse, Annotaion, Browser

  2988 days ago

• • Rahul Nayak@rahul

  

  MUM&Co is a simple bash script that uses Whole Genome Alignment information provided by MUMmer (v4) to detect variants.

  MUM&Co is able to detect:Deletions, insertions, tandem duplications and tandem contractions (>=50bp & <=150kb)Inversions (>=1kb) and translocations (>=10kb)

  Tags: MUM&Co, simple, bash, script, Whole, Genome, Alignment, information, MUMmer, detect, variants

  730 days ago