Results for "Chromosome"

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  • ChromEvol

    ...ture of eukaryotic evolution. Chromosome numbers can change by a dupli...med polyploidy), or by single chromosome changes (ascending dysploidy...scending dysploidy via, e.g., chromosome fusion). Of the various mecha...ays by which the evolution of chromosome number proceeds. For each mod...

    998 days ago

  • RACA: Reference-Assisted Chromosome Assembly

    Rreference-Assisted Chromosome Assembly (RACA), an algorithm to reliably order and orient sequence scaffolds generated by NGS and assemblers into longer chromosomal fragments using...

    561 days ago

  • splitbam: splits a BAM by chromosomes

    splitbam splits a BAM by chromosomes. Using the reference sequence dictionary (...y BAM files if no sam record was found for a chromosome. A pair of 'mock' SAM-Records...exed reference file) REQUIRED. -u (unmapped chromosome name): default:Unmapped -e |...

    233 days ago

  • Pattern Searching in a Single Genome

    ...ng curiosity , but also give answers to many issuess uchas medical conditions . However,there are a number of ways of searching with in a single chromosome.

    591 days ago

  • fineSTRUCTURE v2 & GLOBETROTTER

    ...his page provides information about and downloads for methodology for Chromosome Painting. It is not a facilit...alyse your genome. Sorry if you were misled by the punchy name! About Chromosome Painting Painting is an effic...

    248 days ago

  • Ideoplot

    ...df -or- Rscript Ideoplot.R --annotate annotations.bed Options --ideobed, i A bed file of reference contig lengths/chromosome names --heatmap, -h Fill chromosomes with normalized heatmap...

    248 days ago

  • CAR: Reconstructing Contiguous Regions of an Ancestral Genome

    ...der and orientation of those intervals from their observed adjacencies in modern species. We combine the results from this method with data from chromosome painting experiments to produ...

    154 days ago

  • Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences

    ...cale. Nevertheless is more directed to large-scale since that the main aim of the research is to know where the large-scale [chromosomal by chromosome] of several primates was equa...

    541 days ago

  • COSMIC

    ...table) gives a detailed description of the variant and its location  (e.g. chr11:g.36585230_76606619del, a deletion of roughly 40Mb on chromosome 11). Syntax is based on HGVS...

    383 days ago

  • PRISM

    ...abitrary size deletions, inversions and tandom duplications with the direction of discordant read pairs. PRISM_CTX is a tool for detecting inter-chromosome trans-location events. P...

    313 days ago