Results for "Extract"
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Download mutliple fasta file from NCBI in one GO!!
if you have less time, then use three ways mentioned in bookmark link to extract/download all fasta sequences in single click given that you already have a list of GIs or accession ID...3901 days ago
RNA-Seq De novo Assembly Using Trinity
...al de Bruijn graphs, each representing the transcriptional complexity at at a given gene or locus, and then processes each graph independently to extract full-length splicing isoforms...2956 days ago
- ...Python scripts that wrap and connect bioinformatics tools in order to extract target sequences from high-th...includes post-processing scripts, run after the main pipeline, to also extract the intronic regions flanking...
2730 days ago
GroopM: Metagenomic binning toolset
GroopM is a metagenomic binning toolset. It leverages spatio-temoraldynamics (differential coverage) to accurately (and almost automatically)extract population genomes from multi-samp...2607 days ago
jobTree based python wrapper to run the genome simulation tool suite Evolver
...a running simulation and see detailed status and logging information; extract fasta sequence files from the leaf nodes of a completed simulation; extract pairwise multiple alignment f...2330 days ago
“One code to find them all”: a perl tool to conveniently parse RepeatMasker output files
One code to find them all is a set of perl scripts to extract useful information from RepeatMasker about transposable elements, retrieve their sequences and get some quantitative info...2153 days ago
AlignQC: A tool for assessing an alignment, and generating reports that are easy to share
...arefraction curve analysis. The most basic analysis only requires a BAM file, and outputs a web browser compatible xhtml to visualize/share/store/extract analysis results. https://f1...2089 days ago
S-plot2: creates an interactive, two-dimensional heatmap of sequences
...mplete). In S-plot2, whole eukaryotic chromosomes and smaller prokaryotic genomes can be efficiently compared. The tool includes functionality to extract, analyze, and automate BLAST...2037 days ago
S-plot2: Rapid Visual and Statistical Analysis of Genomic Sequences
...mplete). In S-plot2, whole eukaryotic chromosomes and smaller prokaryotic genomes can be efficiently compared. The tool includes functionality to extract, analyze, and automate BLAST...2032 days ago
VariantBam: Filtering and profiling of next-generational sequencing data using region-specific rules
VariantBam is a tool to extract/count specific sets of sequencing reads from next-generational sequencing files. To save money, disk space and I/O, one may not want to store an ent...2030 days ago
