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Online Courses for biology beginners
Most of the time we face some biological problems while analysing our data computationally. This bookmark is being created to provide list of all free online courses at one place. If you know any other good online cource resources to learn biology please let me know.3935 days ago
Illuminating next generation sequencing data with Go
Another good lecture for Illumina sequencing data analysis from Dan Kortschak, Bioinformatics Group, School of Molecular and Biomedical Science ,The University of Adelaide3899 days ago
- ...ing annotations from one genome assembly to another. Usually lift over is done because there is a new, improved genome assembly for the species and good quality annotations (maybe ma...
2998 days ago
YASS :: genomic similarity search tool
...h step (as provided for example by iedera). Main features of YASS are: multiple, possibly overlapping seeds and a new hit criterion to ensure a good sensitivity/selectivity trade...2916 days ago
- ...ry hierarchy. Many of the post-processing scripts rely on this directory hierarchy, so do not modify it after running the initial pipeline. It is a good idea to run the pipeline for...
2730 days ago
Understanding Greedy Algorithms
Learning greedy algo for biologist. https://www.topcoder.com/community/data-science/data-science-tutorials/greedy-is-good/ This webpage is also useful for the same: http://l...2692 days ago
- ...s GBrowse can draw. This script should contain everything you can probably make use of (e.g. transcripts, segments, etc.) and you can try to find a good way of visualization by exper...
2497 days ago
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
...rol for fastq dataAfterQC can simply go through all fastq files in a folder and then output three folders: good, bad and QC folders, which contains good reads, bad reads and the QC r...2356 days ago
MMseqs2.0: ultra fast and sensitive protein search and clustering suite
...in C++ for Linux, MacOS, and (as beta version, via cygwin) Windows. The software is designed to run on multiple cores and servers and exhibits very good scalability. MMseqs2 can run...2227 days ago
LAMSA: fast split read alignment with long approximate matches
...Split Aligner) is a novel split alignment approach with faster speed and good ability of handling SV events...er than the state-of-the-art long read aligners; mean-while, it also has good ability to handle various cat...2173 days ago
