Results for "GraphMap"
Blogs
Bioinformatics tools developed for Oxford Nanopore data analysis !
...WA Fast nanopore data tuned alignment tool https://github.com/lh3/bwa GraphMapMapper for long and error-prone readshttps://github.com/isovic/graphmap LASTNanopore tuned alignment...2311 days ago
Bookmarks
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
GraphMap is a novel mapper targeted at aligning long, error-prone third-generation seq...a significant improvement over the state-of-the-art for PacBio read mappers. GraphMap was also designed for ease-of...3215 days ago
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://w...a given genomic reference and a GTF file. ...and much more.GraphMap is also used as an overlapper...2515 days ago
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Top-level pages
Some useful Bioinformatics links
...Text https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-15-302 Fast and sensitive mapping of nanopore sequencing reads with GraphMap | Nature Communications http...2232 days ago
Bio-Scripts
Long reads mapper bash script !
...tion of the tools samtools=/home/urbe/anaconda3/bin/samtools graphMapLoc=/home/urbe/Tools/graphmap/bin/Linux-x64/graphmap minim...se specify reads type: ont, pacbio" fi elif [ $toolName == "graphmap" ]; then echo "Mapping wi...2113 days ago
Pack a perl program with their dependencies on Ubuntu !
...splays multiple genomic sequences in the form of a tube mapBy Jit 5 days ago SequenceTubeMapsdisplaysmultiplegenomicsequencestubemapgraphmap github.com - A JavaSc...1502 days ago
Tags
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
GraphMap is a novel mapper targeted at aligning long, error-prone third-generation sequencing data.It is designed to handle Oxford Nanopore MinION 1d and 2d reads with very high sensitivity and accuracy, and also presents a significant improvement over the state-of-the-art for PacBio re...Tags: Nanopore, Sequencing, GraphMap, MinION. NGS
3215 days ago
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/ncomms11307.htmlFeatures Mapping position agnostic to alignment parameters. Consistently very high sensitivity and precision ...Tags: GraphMap, sensitive, accurate, mapper, long, error-prone, reads
2515 days ago
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Comments
Comment on "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads"
urbe@urbo214b[genome] graphmap align -h []GraphMap - A very accurate and sensitive...high error-rate sequence mapperGraphMap Version: v0.5.2Build date: Ju...ile Sikic and Niranjan NagarajanGraphMap is licensed under The MIT Lic...pore, A*STAR, Singapore Usage: graphmap [options] -r <reference_fi...2283 days ago
