3938 days ago
List of In-silico Binding Site Prediction Tools
...teractions observed in experimentally-determined structures for this protein. IBIS also infers/predicts interacting partners and binding sites by homology, by inspecting the protein co...3735 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...; Web app program; Automatic mutant analysis server that provides structural effects of a mutation; Uses BLAST against UniProt and PDB along with homology modeling Input: FASTA protei...2900 days ago
Genome Assembly Tools and Software - PART1 !!
...ate scaffolds (super contigs of sequences joined by N-bases) using the homology provided by a closely related...bly of large scale NGS data by conducting family-specic gene assembly, homology-guided overlap graph construc...2677 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
...y in two or more organisms that are not closely related. Contrast with homology. crown group -- All th...or more taxa with a common ancestor that also possessed that feature. homology -- Two structures are conside...2453 days ago
Tools for bacterial whole genome annotation
.... PGAP: NCBI has developed an automatic prokaryotic genome annotation pipeline that combines ab initio gene prediction algorithms with homology based methods. The first vers...2323 days ago
Protein-Protein Interaction Sites Predictions !
...l network method for predicting protein-protein interaction sites HOMCOS A server to predict interacting protein pairs and interacting sites by homology modeling of complex structure...2193 days ago