Results for "KAT"
Bio-Scripts
...added / updated specs: - kat The following packages w...6.2 MB bioconda kat-2.0.8 |...linux-64::jemalloc-4.5.0-0 kat bioconda/linux...#################### | 100% kat-2.0.8 | 7.5 MB...1037 days ago
- #!/bin/bash #Counting k-mers for different k echo "k,unique,distinct,total" for k in {1..15}; do kat hist -o phiX_$k.hist -m $k phiX.fasta >/dev/null 2>&1 egrep -v '^#' phiX_$k.hist|awk '{if ($1==1) u=$2; d+=$2; t+=$2*$1;}\ END{print "'$k',"u","d","t}' done
785 days ago
