Results for "MinION"
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GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
GraphMap is a novel mapper targeted at aligning long, error-prone third-generation sequencing data.It is designed to handle Oxford Nanopore MinION 1d and 2d reads with very...3216 days ago
Scaffolding of a bacterial genome using MinION nanopore sequencing
...ved. A new generation of sequencers offering substantially longer reads is emerging, notably the Pacific Biosciences (PacBio) RS II system and the MinION system, released in early 201...3216 days ago
CANU: Assembling Large Genomes with Single-Molecule Sequencing and Locality Sensitive Hashing.
Canu is a fork of the Celera Assembler designed for high-noise single-molecule sequencing (such as the PacBio RSII or Oxford Nanopore MinION). The software is currently alph...2905 days ago
poRe: an R package for the visualization and analysis of nanopore sequencing data
...ivation: The Oxford Nanopore MinION device represents a unique se...by the USB port of a laptop, the MinION has huge potential applicatio...a suite of tools specifically for MinION data. Results: Here we...s version allows users to analyse MinION data on the Windows laptop at...2346 days ago
IONiseR: tools for the quality assessment of data produced by Oxford Nanopore’s MinION sequencer
This package is intended to provide tools for the quality assessment of data produced by Oxford Nanopore’s MinION sequencer. It includes a functions to generate a number plots f...2346 days ago
INC-Seq: accurate single molecule reads using nanopore sequencing
INC-Seq reads enabled accurate species-level classification, identification of species at 0.1 % abundance and robust quantification of relative abundances, providing a cheap and effective approach for pathogen detection and microbiome profiling on the MinION system.2342 days ago
Oxford Nanopore Sequencing, Hybrid Error Correction, and de novo Assembly of a Eukaryotic Genome
...pore has been postulated as a method for sequencing DNA for several decades. Recently, a nanopore-based sequencing instrument, the Oxford Nanopore MinION, has become available that we...2340 days ago
MinION_GC: An R script to do some QC on MinION data
...o it's a lot quicker than most other things out there: it takes about a minute to analyse a 4GB flowcell on my laptop. https://github.com/roblanf/minion_qc2336 days ago
mojolicious: a next generation web framework for the Perl programming language.
...ience developing Catalyst, free and open source. Hundreds of 3rd party extensions and high quality spin-off projects like the Minion job queue. http://moj...2296 days ago
CLAW: Chloroplast Long-read Assembly Workflow
...bly of chloroplast genomes. CLAW uses chloroplast long-reads, which are baited out of larger read libraries (e.g., an Oxford Nanopore Technologies MinION read library derived from pho...65 days ago
