Results for "Modules"

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  • Is there any quick way to check the installed Perl modules from Linux/Unix command line.

    We always need to keep track of all the Perl modules, and install new one if required. Generally, whenever we run the Perl script it flash error message with the name of module not installed. I would like to know the quicker way to check the installed modules on any system/server.

    Tags: Unix, Linux, Perl, Modules, Command Line

    1495 days ago

  • Installing Perl GD Module

    In comparative genome analysis work, we usually compare more than two genomes and looks for syntenic regions amongst them. In my research I used Evolution Highway (RH) http://eh-demo.ncsa.uiuc.edu/, which is a collaborative project designed to provide a visual means for simultaneously comparing...

    Tags: Perl, GD, Modules, Circos, Evolution Highway, MAc Os, MS Window, Linux

    1487 days ago

  • Next generation sequencing in R or bioconductor environment

    There are many R software and bioconductor packages for NGS data analysis, some of them are as follows Biostrings The Biostrings package from Bioconductor provides an advanced environment for efficient sequence management and analysis in R. It contains many speed and memory effective string con...

    Tags: Bioinformatics, Computational Biology, NGS, R, Bioconductor, Packages, Modules, Next generation sequencing

    1172 days ago

  • scikit-learn

    Machine Learning in Python Simple and efficient tools for data mining and data analysis Accessible to everybody, and reusable in various contexts Built on NumPy, SciPy, and matplotlib Open source, commercially usable - BSD license More at http://scikit-learn.org/stable/index.html  

    Tags: Bioinformatics, Computational Biology, Python, Machine Learning, Modules, Scikit, Learn

    535 days ago

  • CSBB-v1.0

    CSBB is a command line based bioinformatics suite to analyze biological data acquired through varied avenues of biological experiments. CSBB is implemented in Perl, while it also leverages the use of R and python in background for specific modules. Major focus of CSBB is to allow users from biolo...

    Tags: Bioinformatics, CSBB-v1.0, Tools, Modules, Packages, Analyse, Perl, R

    415 days ago

  • How to install Perl modules on Mac OS X in easy steps !!

    Today at work, I learned how to install Perl modules using CPAN. It’s a lot easier than I thought. You see, for the past couple of years, I’ve been a bit frustrated because OS X does not come with a whole lot of Perl modules pre-installed, and for all I googled, I couldn’t...

    Tags: Bioinformatics, Perl, Mac, MacOSX, Modules, Install, CPAN

    302 days ago

  • Perl module upgrade on Linux: $ sudo cpan then cpan[1]> upgrade #Upgrade #Perl #Modules

    Tags: Upgrade, Perl, Modules

    273 days ago

  • use File::Basename; use lib dirname (__FILE__); # To search lib in local folder #Perl #Modules

    Tags: Perl, Modules

    120 days ago

  • How to install Perl packages on servers?

    I am problem installing Perl module on cluster/server without root. Can you please recommend me a easy way or alternative way to install it.

    Tags: Bioinformatics, Perl, Server, Cluster, Packages, Modules, Install, Script

    179 days ago