Results for "NGS"

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  • RA at IISR Kozhikode

    INDIAN INSTITUTE OF SPICES RESEARCH (Indian Council of Agricultural Research) Marikunnu P.O., Kozhikode – 673 012, Kerala Walk- in- Test cum Interview (based on test) for the selection of Research Associate under the scheme “Distributed Information Sub Centre –DISC” & Research Assista...

    Tags: Bioinformatics, Computational biology, Biology, Genomics, NGS, SRF, RA, IISR, Kozhikode, India

    1111 days ago

  • Managing and Analyzing Next-Generation Sequence Data

    Centralized Bioinformatics Core Facilities provide shared resources for the computational and IT requirements of the investigators in their department or institution. As such, they must be able to effectively react to new types of experimental technology. Recently faced with an unprecedented floo...

    Tags: Bioinformatics, Computational Biology, Data, Managment, NGS

    1106 days ago

  • Extract list of read ID from bam file: samtools view mbi.sorted.bam |perl -ne '/ID/ && print' > extractedID.sam #Extract #Ids #SAM #BAM #NGS

    Tags: Extract, Ids, SAM, BAM, NGS

    1103 days ago

  • FastaQ 2 Fasta Oneliner: paste - - - -< totalRNA_placental_1.fastq | perl -pale'$_="@F[0..1]"'|tr "\^@" "\>" | perl -pale 's/\s/\n/g' #Oneliner #NGS #FastaQ #Fasta

    Tags: Oneliner, NGS, FastaQ, Fasta

    1103 days ago

  • Next generation sequencing(NGS) books

    Employing different technologies, the purpose of NGS platform is to decode the identity or modification on the nucleotides. NGS platforms evolve quickly and capture the main stream. This bookmark is created to provide NGS online books links.

    Tags: NGS, Pipeline, Method, Books, Tutorial

    1096 days ago

  • Perl one-liner for bioinformatician !!!

    With the emergence of NGS technologies, and sequencing data most of the bioinformaticians mung and wrangle around massive amounts of genomics text. There are several "standardized" file formats (FASTQ, SAM, VCF, etc.) and some tools for manipulating them (fastx toolkit, samtools, vcftools, etc.),...

    Tags: Bioinformatics, Computational Biology, Perl, NGS, Genome, Hacking, One-liner, Oneliner

    1096 days ago

  • Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format. https://github.com/lh3/seqtk #FASTA #FASTAQ #NGS

    Tags: FASTA, FASTAQ, NGS

    1096 days ago

  • How to sequence the human genome - Mark J. Kiel

    View full lesson: http://ed.ted.com/lessons/how-to-sequence-the-human-genome-mark-j-kiel Your genome, every human's genome, consists of a unique DNA sequence of A's, T's, C's and G's that tell your cells how to operate. Thanks to technological advances, scientists are now able to know the sequen...

    Tags: Bioinformatics, Computational Biology, Genome, Sequencing, NGS, Mapping

    1096 days ago

  • Bacterial genome assembly tips using Valvet http://pathogenomics.bham.ac.uk/blog/2009/09/tips-for-de-novo-bacterial-genome-assembly/ #Assembly #NGS #Bacteria #Genome #Tricks #Tips #Velvet

    Tags: Assembly, NGS, Bacteria, Genome, Tricks, Tips, Velvet

    1095 days ago

  • Genomics and Personalized Medicine Breakthroughs

    http://bit.ly/e8QGzY Human genome mapping is now enabling a breakthrough in medical innovation -- personalized medicine. What does this mean for patients? We can now identify predispositions to disease, predict how we metabolize drugs, and figure out what kinds of treatments we may respond to, an...

    Tags: Bioinformatics, Computational Biology, Personalised Medicine, Genomics, NGS

    1093 days ago