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Results for "Plot"

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• • Shruti Paniwala@shruti

  

  TGNet

  Recent technological progress has greatly facilitated de novo genome sequencing. However, de novo assemblies consist in many pieces of contiguous sequence (contigs) arranged in thousands of scaffolds instead of small numbers of chromosomes. Confirming and improving the quality...

  Tags: Bioinformatics, Analysis, NGS, Stats, Assemble, Plot, TGNet, Visualize, Genome

  2802 days ago

• • Jit@jit.aber

  

  The clean R graphs http://shinyapps.org/apps/RGraphCompendium/index.php #R #Graphs #Clean #Plot

  Tags: R, Graphs, Clean, Plot

  2795 days ago

• • Jit@jit.aber

  

  Sushi: An R/Bioconductor package for visualizing genomic data

  Sushi: An R/Bioconductor package for visualizing genomic data

  Tags: Bioinformatics, Analysis, NGS, R, Plot, Sushi, Genome

  2795 days ago

• • Jit@jit.aber

  

  Plot genomoc data https://cran.r-project.org/web/packages/circlize/vignettes/genomic_plot.pdf #Circlize #R #Genome #Plot

  Tags: Circlize, R, Genome, Plot

  2794 days ago

• • Jit@jit.aber

  

  R-chie

  R-chie allows you to make arc diagrams of RNA secondary structures, allowing for easy comparison and overlap of two structures, rank and display basepairs in colour and to also visualize corresponding multiple sequence alignments and co-variation information.R4RNA is the R package power...

  Tags: Bioinformatics, Analysis, NGS, R-chie, Genome, RNA, Plot, Visualize

  2794 days ago

• • Abhimanyu Singh@abhimanyu

  

  Circos like image with R circlize package https://cran.r-project.org/web/packages/circlize/vignettes/visualize_relations_by_chord_diagram.pdf #R #Circlize #Plot #Circos

  Tags: R, Circlize, Plot, Circos

  2790 days ago

• • Jit@jit.aber

  

  R pretty scripts http://www.ncss.com/software/ncss/ncss-plots-and-graphs/ #R #Script #Plot #Idea #Graph

  Tags: R, Script, Plot, Idea, Graph

  2760 days ago

• • Anjana@anjana

  

  Murasaki

  Murasaki is an anchor alignment program that is exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 35 wall minutes), or 8 mammals in 21 CPU hours (42 wall minutes)) scalable (Arbitrarily parallelizable across multiple nodes using MPI) memory efficient. (Even a singl...

  Tags: Bioinformatics, Musrsaki, Plot, Synteny, Genome, Viewer, Comparative genomics

  2765 days ago

• • Jit@jit.aber

  

  Forest plot https://cran.r-project.org/web/packages/forestplot/vignettes/forestplot.html #R #Forest #Plot #Example #Explanation #PrettyPlot

  Tags: R, Forest, Plot, Example, Explanation, PrettyPlot

  2759 days ago

• • Shruti Paniwala@shruti

  

  Coverage R Plot http://davetang.org/muse/2013/09/07/creating-a-coverage-plot-in-r/ #R #Plot #Genome #Image #NGS #BAM

  Tags: R, Plot, Genome, Image, NGS, BAM

  2740 days ago

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