Results for "Reconstruction"

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  • DeCoSTAR - Detection of Co-evolution

    DeCoSTAR is a software which aims at reconstructing ancestral gene or genome organizations, in the form of sets of neighborhood relations -adjacencies- between pairs of ancestral genes or gene domains.Ancestral genes or domains are deduced from reconciled gene trees in a context of birth, speciat...

    Tags: Bioinformatics, DeCoSTAR, Detection, Co-evolution, Reconstruction, Ancestral, Gene, Genome

    187 days ago

  • CAR: Reconstructing Contiguous Regions of an Ancestral Genome

    We describe a new method for predicting the ancestral order and orientation of those intervals from their observed adjacencies in modern species. We combine the results from this method with data from chromosome painting experiments to produce a map of an early mammalian genome that accounts fo...

    Tags: Reconstruction, Contiguous, Regions, Ancestral, Genome, Bioinformatics, CAR

    153 days ago

  • ANGES: reconstructing ANcestral GEnomeS maps

    This page contains the software ANGES 1.01, that aims at reconstucting ancestral genome maps from homologous markers in extant related genomes. Download Program, version 1.01 (July 10, 2012, documentation updated in August 2014) Examples with results (featured ancestors: boreoeutherian,...

    Tags: Reconstruction, Ancestral, Genomes, Maps, ANGES

    153 days ago

  • DESCHRAMBLER

    DESCHRAMBLER is shown to produce highly accurate reconstructions using data simulation and by benchmarking it against other reconstruction tools You can find the detail of reconstructed data at http://bioinfo.konkuk.ac.kr/DESCHRAMBLER/

    Tags: DESCHRAMBLER, Synteny, Ancestral, Reconstruction, Genome

    110 days ago

  • Ancestral sequence reconstruction (ASR) or ancestral gene/sequence reconstruction/resurrection tools to study molecular evolution

    Ancestral sequence reconstruction (ASR) – also known as ancestral gene/sequence reconstruction/resurrection – is a technique used in the study of molecular evolution. The method consists of the synthesis of an ancestral gene and expression of the correspo...

    Tags: Ancestral, sequence, reconstruction, ASR, ancestral, gene, sequence, reconstruction, resurrection, technique, molecular, evolution

    139 days ago